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BIT 410/510: Manipulation of Recombinant DNA

Overview:

  • Experience biotechnology research and explore its impact in research and industry.
  • Students will gain hands-on experience with modern biotechnolgy techniques and develop technical skills for future laboratory research and industry postions.

Course Objectives:

  • CO 1. Design strategies to manipulate DNA to create new proteins with applications in bioremediation, drug discovery, pharmaceuticals, biomedicine, food science, and many other disciplines.
  • CO 2. Explain a variety of techniques in the manipulation of recombinant DNA and protein expression.
  • CO 3. Create a detailed written record of experimental procedures, results, and conclusions that is reliable and replicable.
  • CO 4. Interpret data and controls related to gene cloning, protein expression, a tested hypothesis, and sequence data. 
  • CO 5. Troubleshoot molecular biology experiments that do not work.
  • CO 6. Reflect on their own thinking and the thinking of others from a variety of disciplines and backgrounds.
  • CO 7. Apply critical and creative thinking skills and behaviors in the process of solving problems or addressing questions that span multiple disciplines, including chemistry, biology, pharmacology, physiology, and engineering.
  • CO 8. (BIT 510 students only). Design a cloning strategy for manipulating DNA using specialized software with the purpose ofexpressing the recombinant protein in a host system.

Lectures:

  • Central Concepts in Biotechnology
  • Plasmid Maps & Restriction Enzymes
  • Molecular Cloning Strategies & PCR
  • Gibson Assembly & Transformation
  • Fusion Proteins & Reading Frame
  • Screening Recombinant Clones
  • SDS-PAGE, Antibodies & Western Blot
  • Protein Purification & Quantification
  • Animal Cell Culture & Aseptic Technique
  • Cell Signaling & Experimental Design

Labs:

CaMPARI Cloning

  • Hypothesis Design
  • Cloning by PCR
  • Plasmid DNA Purification/Quantification
  • Ligation and Transformation
  • Screening Clones (Fluorescence, PCR, Sequencing)
  • Gibson Assembly

CaMPARI Expression in E. coli and animal cells

  • Hypothesis Testing
  • Protein Purification
  • SDS-PAGE & Western Blotting
  • Animal Cell Culture & Transfection
  • Fluorescence Microscopy
  • Quantitative Data Anaylsis
BIT 410/510 lab roadmap. Figure created with BioRender.

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